deep learning

Missing MRI Pulse Sequence Synthesis using Multi-Modal Generative Adversarial Network

Magnetic resonance imaging (MRI) is being increasingly utilized to assess, diagnose, and plan treatment for a variety of diseases. The ability to visualize tissue in varied contrasts in the form of MR pulse sequences in a single scan provides …

ERGO: Efficient Recurrent Graph Optimized Emitter Density Estimation in Single Molecule Localization Microscopy

Single molecule localization microscopy (SMLM) allows unprecedented insight into the three-dimensional organization of proteins at the nanometer scale. The combination of minimal invasive cell imaging with high resolution positions SMLM at the …

[Invited Talk] MM-GAN: Multi-Modal Generative Adversarial Network for Missing MRI Pulse Sequence Synthesis

Invited to present my research in which we proposed a multi-input, multi-output generative adversarial network (GAN) called MM-GAN as a poster presentation.

[Invited Talk] Missing MRI Pulse Sequence Synthesis using Multi-Modal Generative Adversarial Network

Invited to present my research in which we proposed a multi-input, multi-output generative adversarial network (GAN) called MM-GAN.

[Paper Presentation] Deep Anomaly Detection with Outlier Exposure

Presented an interesting paper from ICLR 2019 that performs out-of-distribution sample detection using a simple framework.

[Paper Presentation] Natural Language Processing in Text Mining for Structural Modeling of Protien Complexes

Presenting a highly scientific paper in a way that high school students can understand. The paper is a state-of-art method that uses natural language processing based approach towards structural modelling of proteins.

Knowledge Extraction and Text Mining in Bioinformatics

Literature survey on the uses of text mining and natural language processing methods in bioinformatics.

Dealing with Missing Modalities in Medical Images What's Missing?

A talk regarding the current state-of-art in handling missing inputs for segmentation or classification problems.

A CADe System for Gliomas in Brain MRI using Convolutional Neural Networks

Inspired by the success of Convolutional Neural Networks (CNN), we develop a novel Computer Aided Detection (CADe) system using CNN for Glioblastoma Multiforme (GBM) detection and segmentation from multi channel MRI data. A two-stage approach first …

Select, Attend, and Transfer: Light, Learnable Skip Connections

Skip connections in deep networks have improved both segmentation and classification performance by facilitating the training of deeper network architectures, and reducing the risks for vanishing gradients. They equip encoder-decoder-like networks …